Systematic implications from a robust phylogenetic reconstruction of the genus Helianthemum (Cistaceae) based on genotyping-by-sequencing (GBS) data
DOI:
https://doi.org/10.3989/ajbm.2601Keywords:
Cistaceae, molecular systematics, Next Generation SequencingAbstract
Molecular systematics requires the establishment of a robust phylogenetic framework including extensive geographical and taxonomic sampling. In this work, we proposed systematic changes in the genus Helianthemum based on phylogenetic trees obtained by both maximum likelihood and Bayesian analyses of GBS data. The implications of these phylogenetic results for the systematics of Helianthemum entail the establishment of a new subgenus and novel re-ascriptions of sections and species along with some nomenclatural novelties. The following new combinations are proposed: Helianthemum subg. Eriocarpum (Dunal) Martín-Hernanz, Velayos, Albaladejo & Aparicio; H. oelandicum subsp. conquense (Borja & Rivas Goday ex G.López) Martín-Hernanz, Velayos, Albaladejo & Aparicio; H. nummularium subsp. cantabricum (M.Laínz) Martín-Hernanz, Velayos, Albaladejo & Aparicio; H. nummularium subsp. tinetense (M.Mayor & Fern.Benito) Martín-Hernanz, Velayos, Albaladejo & Aparicio.
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References
Aberer A.J., Kobert K., & Stamatakis, A. 2014. ExaBayes: massively parallel Bayesian tree inference for the whole-genome era. Molecular Biology and Evolution 31: 2553-2556. https://doi.org/10.1093/molbev/msu236
Albaladejo R., Martín-Hernanz S., Reyes-Betancort J.A., Santos-Guerra A., Olangua-Corral M. & Aparicio A. 2021. Reconstruction of the spatiotemporal diversification and ecological niche evolution of Helianthemum (Cistaceae) in the Canary Islands using genotyping-by-sequencing data. Annals of Botany 127: 597-611. https://doi.org/10.1093/aob/mcaa090
Aparicio A. & Albaladejo R.J. 2017. On the identity of Helianthemum mathezii and H. pomeridianum (Cistaceae). Anales del Jardín Botánico de Madrid 74: e060. https://doi.org/10.3989/ajbm.2472
Aparicio A., Martín-Hernanz S., Parejo-Farnés C., Arroyo J., Lavergne S., Yesilyurt E.B., Zang M-L., Rubio E. & Albaladejo R.G. 2017. Phylogenetic reconstruction of the genus Helianthemum (Cistaceae) using plastid and nuclear DNA-sequences: systematic and evolutionary inferences. Taxon 66: 868-885. https://doi.org/10.12705/664.5
Crespo M.B., Alonso M.A., Vicente A. & Villar, J.L. 2016. A new North African subspecies in the Helianthemum origanifolium aggregate (H. subg. Plectolobum, Cistaceae). Phytotaxa 252: 263-272. https://doi.org/10.11646/phytotaxa.252.4.2
DeFilippis V.R. & Moore W.S. 2000. Resolution of phylogenetic relationships among recently evolved species as a function of amount of DNA sequence: an empirical study based on woodpeckers (Aves: Picidae). Molecular Phylogenetics and Evolution 16: 143-160. https://doi.org/10.1006/mpev.2000.0780
Dunal F. 1824. Cistineae. In Candolle A.P. de (ed.), Prodromus systematis naturalis regni vegetabilis, vol. 1: 263-288. Sumptibus sociorum Treuttel et Würtz, Parisiis [Paris].
Elshire R.J., Glaubitz J.C., Sun Q., Poland J.A., Kawamoto K., Buckler E.S. & Mitchell S.E. 2011. A robust, simple Genotyping-by-Sequencing (GBS) approach for high diversity species. PLoS One 6: e19379. https://doi.org/10.1371/journal.pone.0019379
Fernández-Mazuecos M., Mellers G., Vigalondo B., Sáez L., Vargas P. & Glover B.J. 2018. Resolving Recent Plant Radiations: Power and Robustness of Genotyping-by-Sequencing. Systematic Biology 67: 250-268. https://doi.org/10.1093/sysbio/syx062
Greuter W., Burdet H. & Long, G. 1984. Med-Checklist. Pteridophyta, Gymnospermae, Dicotyledones (Acanthaceae-Cneoraceae) 1: 320-328. Conservatoire et Jardin Botaniques, Genève.
Grosser W. 1903. Cistaceae. In Engler H.G.A. (ed.), Das Pflanzenreich vol. 4. Berlin, Leipzig.
Guinea E. 1954. Cistáceas españolas (con exclusión del género Cistus). Instituto forestal de investigaciones y experiencias, Madrid.
Janchen E. 1907. Helianthemum canum (L.) Baumg. und seine nächsten Verwandten. Abhandlungen der K. K. Zool.-Botan. Gesellschaft in Wien 4: 1-67.
Janchen E. 1925. Cistaceae. In Engler A. (ed.), Die Natürlichen Pflanzenfamilien, ed. 2, 21: 289-313. Engelmann, Leipzig.
López-González G. 1992. Apuntes para justificar el tratamiento del género Helianthemum Miller, s.l. (Cistaceae), en Flora Iberica. Anales del Jardín Botánico de Madrid 50: 35-63.
López-González G. 1993. Helianthemum Mill. In Castroviejo S., Aedo C., Cirujano S., Laínz M., Montserrat P., Morales R., Muñoz Garmendia F., Navarro C., Paiva J. & Soriano C. (eds.), Flora iberica 3: 365-421. Real Jardín Botánico, CSIC, Madrid.
Martín-Hernanz S., Albaladejo R.G., Lavergne S., Rubio E., Grall A. & Aparicio A. 2021. Biogeographic history and environmental niche evolution in the Palearctic genus Helianthemum (Cistaceae). Molecular Phylogenetics and Evolution 163: 107238. https://doi.org/10.1016/j.ympev.2021.107238
Martín-Hernanz S., Aparicio A., Fernández-Mazuecos M., Rubio E., Reyes-Betancort A., Santos-Guerra A., Olangua-Corral M. & Albaladejo R.G. 2019a. Maximize Resolution or Minimize Error? Using Genotyping-By-Sequencing to Investigate the Recent Diversification of Helianthemum (Cistaceae). Frontiers in Plant Science 10: 1416. https://doi.org/10.3389/fpls.2019.01416
Martín-Hernanz S., Martínez-Sánchez S., Albaladejo R.G., Lorite J., Arroyo J. & Aparicio A. 2019b. Genetic diversity and differentiation in narrow versus widespread taxa of Helianthemum (Cistaceae) in a hotspot: The role of geographic range, habitat, and reproductive traits. Ecology and Evolution 9: 3016-3029. https://doi.org/10.1002/ece3.4481
Mateo Sanz, G. 2012. Nuevos taxones del género Helianthemum Miller en la zona oriental de la Península Ibérica, I. Flora Montiberica 50: 30-43.
Pérez Da Costa J.M. & Mateo Sanz G. 2012. Nuevos taxones del género Helianthemum Miller en la zona oriental de la Península Ibérica, II. Flora Montiberica 50: 44-61.
Pignatti S. 1982. Flora d'Italia vol. 2. Edagricole, Bologna.
Proctor M. & Heywood V. 1968. Helianthemum Miller. In Tutin T.G., Heywood V.H., Burges N.A., Moore D.M., Valentine D.H., Walters S.M & Webb D.A. (eds.), Flora Europaea 2: 286-292. Cambridge University Press, Cambridge.
Quézel P. & Santa S. 1962. Nouvelle flore de l'Algérie et des régions désertiques méridionales. Centre Nationale de la Recherche Scientifique, Paris.
Raynaud C. 1987. Atlanthemum Raynaud, un nouveau genre pour la famille des Cistaceae. Anales del Jardín Botánico de Madrid 44: 309-317.
Raynaud C. 1999. Cistaceae. In Fennane M., Ibn Tattou M., Mathez J., Aïcha O., El Oualidi, J. (eds.), Flore pratique du Maroc: Manuel de détermination des plantes vasculaires vol. 1. Travaux de l'Institut Scientifique, Université Mohammed V, Série Botanique 36. Rabat: Institut Scientifique Université Mohammed V, Rabat.
Soubani E. 2010. Systematics, phylogeography and multiple origins of morphs in two species complexes belonging to Cistaceae, Helianthemum oelandicum and H. nummularium. Ph.D. dissertation, Lund University, Lund.
Soubani E., Hedrén M. & Widén B. 2014a. Phylogeography of the European rock rose Helianthemum nummularium (Cistaceae): Incongruent patterns of differentiation in plastid DNA and morphology. Botanical Journal of the Linnean Society 176: 311-331. https://doi.org/10.1111/boj.12209
Soubani E., Hedrén M. & Widén B. 2014b. Genetic and morphological differentiation across a contact zone between two postglacial immigration lineages of Helianthemum nummularium (Cistaceae) in southern Scandinavia. Plant Systematics and Evolution 301: 1499-1508. https://doi.org/10.1007/s00606-014-1170-1
Spach E. 1836. Conspectus monographiae Cistacearum. Annales des Sciences Naturelles, Botanique, ser. 2, 6: 357-375.
Stamatakis A. 2006. RAxML-VI-HPC: maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models. Bioinformatics 22: 2688-2690. https://doi.org/10.1093/bioinformatics/btl446
Thompson J.D. 2020. Plant Evolution in the Mediterranean. Insights for Conservation. Oxford University Press, Oxford. https://doi.org/10.1093/oso/9780198835141.001.0001
Tzvelev, N. 2006. Flora of Russia: The European part and bordering regions vol. 9. CRC Press/Balkema, Rotterdam.
Volkova P.A., Schanzer I.A., Soubani E., Meschersky I.G. & Widén B. 2016. Phylogeography of the European rock rose Helianthemum nummularium s.l. (Cistaceae): Western richness and eastern poverty. Plant Systematics and Evolution 302: 781-794. https://doi.org/10.1007/s00606-016-1299-1
Willkomm M. 1856. Icones et descriptiones plantarum novarum criticarum et rariorum Europae Austro-Occidentalis praecipue Hispaniae vol. 2. Sumtibus A.H. Payne, Leipzig.
Yuzepchuk S.V. 1974. Helianthemum Adans. In Schishkin B.K. (ed.), Flora of the U.S.S.R. 15: 248-260. Trans. from Russian by N. Landau. Israel Program for Scientific Translations, Jerusalem.
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Funding data
Ministerio de Economía y Competitividad
Grant numbers CGL2014-52459-P;CGL2017-82465-P;CGL2017-85204-C3-1-P